processProblematicPeaks: Generate list of problematic peaks
In RMassBank: Workflow to process tandem MS files and build MassBank records
Description
Usage
Arguments
Value
Author(s)
Description
Generates a list of intense unmatched peaks for further review (the "failpeak list") and exports it if the archive name is given.
Usage
1
processProblematicPeaks(w, archivename = NA)
Arguments
w
msmsWorkspace to analyze.
archivename
Base name of the archive to write to (for "abc" the exported failpeaks list will be "abc_Failpeaks.csv").
if the compoundlist is complete, "tentative", if at least a formula is present or "unknown"
if the only know thing is the m/z
mode
Processing mode (pH etc)
Value
Returns the aggregate data.frame with added column "problematic" (logical) which marks peaks which match the problematic criteria
Author(s)
stravsmi
RMassBank documentation built on Nov. 8, 2020, 6:06 p.m.
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Description Usage Arguments Value Author(s)
Description
Generates a list of intense unmatched peaks for further review (the "failpeak list") and exports it if the archive name is given.
Usage
1 | processProblematicPeaks(w, archivename = NA)
|
Arguments
w |
|
archivename |
Base name of the archive to write to (for "abc" the exported failpeaks list will be "abc_Failpeaks.csv"). if the compoundlist is complete, "tentative", if at least a formula is present or "unknown" if the only know thing is the m/z |
mode |
Processing mode (pH etc) |
Value
Returns the aggregate data.frame with added column "problematic" (logical) which marks peaks which match the problematic criteria
Author(s)
stravsmi
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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