selectSpectra: Select a subset of spectra matching properties

In RMassBank: Workflow to process tandem MS files and build MassBank records

Description

From a list of RmbSpectraSets, returns the spectra which match a criterion (found, complete, empty as in checkSpectra). This can be returned either as a TRUE/FALSE vector, as a vector of indices for matching elements, as a vector of RmbSpectraSet objects matching the conditions, or as a vector of RmbSpectraSet objects NOT matching the conditions (sic!).

Usage

selectSpectra(s, property, value = "logical")

## S4 method for signature 'RmbSpectraSetList,character'
selectSpectra(s, property, value = "logical")

## S4 method for signature 'msmsWorkspace,character'
selectSpectra(s, property, value = "logical")

Arguments

s	The RmbSpectraSetList or msmsWorkspace to select RmbSpectraSets from.
property	The property to check (found, complete or empty)
value	logical if a TRUE/FALSE list should be returned; index if a vector of matching indices should be returned, object if matching objects should be returned, mismatch if mismatching objects should be returned.

Value

As described above.

Methods (by class)

• s = RmbSpectraSetList,property = character: A method for selecting spectra from a spectra set list

• s = msmsWorkspace,property = character: A method for selecting spectra from an msmsWorkspace

Author(s)

stravsmi

RMassBank documentation built on Nov. 8, 2020, 6:06 p.m.