RUVSeq: Remove Unwanted Variation from RNA-Seq Data

This package implements the remove unwanted variation (RUV) methods of Risso et al. (2014) for the normalization of RNA-Seq read counts between samples.

AuthorDavide Risso [aut, cre, cph], Sandrine Dudoit [aut], Lorena Pantano [ctb], Kamil Slowikowski [ctb]
Date of publicationNone
MaintainerDavide Risso <risso.davide@gmail.com>
LicenseArtistic-2.0
Version1.8.0
https://github.com/drisso/RUVSeq

View on Bioconductor

Files in this package

RUVSeq/DESCRIPTION
RUVSeq/NAMESPACE
RUVSeq/R
RUVSeq/R/AllGenerics.R RUVSeq/R/RUVg-methods.R RUVSeq/R/RUVr-methods.R RUVSeq/R/RUVs-methods.R RUVSeq/R/helper.R RUVSeq/R/residuals.DGEGLM.R
RUVSeq/build
RUVSeq/build/vignette.rds
RUVSeq/inst
RUVSeq/inst/CITATION
RUVSeq/inst/NEWS
RUVSeq/inst/doc
RUVSeq/inst/doc/RUVSeq.R
RUVSeq/inst/doc/RUVSeq.Rnw
RUVSeq/inst/doc/RUVSeq.pdf
RUVSeq/man
RUVSeq/man/RUVSeq-package.Rd RUVSeq/man/RUVg.Rd RUVSeq/man/RUVr.Rd RUVSeq/man/RUVs.Rd RUVSeq/man/makeGroups.Rd RUVSeq/man/residuals.DGEGLM.Rd
RUVSeq/tests
RUVSeq/tests/RUVg.R
RUVSeq/tests/RUVr.R
RUVSeq/tests/RUVs.R
RUVSeq/vignettes
RUVSeq/vignettes/RUVSeq.Rnw
RUVSeq/vignettes/biblio.bib

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