NEWS.md
In RaggedExperiment: Representation of Sparse Experiments and Assays Across Samples

Update package to changes in MatrixGenerics (new location of the rowRanges generic)

Adjust to changes from SummarizedExperiment::assay (withDimnames argument)
Reference simplifyTCGA helper function from TCGAutils in examples
Restore original real-world qreduceAssay example and include alternative qreduceTCGA example

Include reference to TCGAutils functions for qreduceAssay examples
Add robustness to RaggedExperiment constructor including unit tests
Include class and assay operations overview schematic in the vignette

RaggedExperiment vignette now available.
Submission to Bioconductor/Contributions issue tracker

Software for copy number, mutation, and other ragged array data representations
RaggedExperiment class and basic methods: subsetting, dimnames, etc.
Assay methods expose a particular metadata column and creates a retangular matrix
Coerce functions from RaggedExperiment to SummarizedExperiment class available

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RaggedExperiment documentation built on April 17, 2021, 6:08 p.m.

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