Files in RareVariantVis

A suite for analysis of rare genomic variants in whole genome sequencing data

NAMESPACE

DESCRIPTION

build/vignette.rds

R/chromosomeVis.R R/multipleVis.R R/rareVariantVis.R R/movingAverage.R R/callHomozygous.R R/getCrisprGuides.R

vignettes/interactive.png

vignettes/RareVariantsVis.Rnw

vignettes/CoriellIndex_S1_chr19.png

man/rareVariantVis.Rd man/getCrisprGuides.Rd man/callHomozygous.Rd man/chromosomeVis.Rd man/multipleVis.Rd man/movingAverage.Rd

inst/CITATION

inst/doc/RareVariantsVis.R inst/doc/RareVariantsVis.pdf

inst/doc/RareVariantsVis.Rnw

inst/extdata/RareVariants_CoriellIndex_S1.txt

inst/extdata/CentromeresHg19.txt

inst/extdata/All_20160601_chr19_9-10.vcf.recode.vcf.gz.tbi

inst/extdata/CoriellIndex_S1_chr19_9-10_S1.vcf.recode.vcf.gz.tbi

inst/extdata/StructuralVariants_Coriell_S2.txt

inst/extdata/CoriellIndex_S1.sv.vcf.gz

inst/extdata/RareVariants_Coriell_S2.txt

inst/extdata/StructuralVariants_Coriell_S3.txt

inst/extdata/uniprot-all_chr19_9-10.txt

inst/extdata/RareVariants_Coriell_S3.txt

inst/extdata/ExAC.r0.3.1.sites.vep_chr19_9-10.vcf.recode.vcf.gz

inst/extdata/CoriellIndex_S1_chr19_9-10_S1.vcf.recode.vcf.gz

inst/extdata/StructuralVariants_CoriellIndex_S1.txt

inst/extdata/nexterarapidcapture_exome_targetedregions_v1.2_chr19_9-10.bed

inst/extdata/CoriellIndex_S1.sv.vcf.gz.tbi

inst/extdata/ExAC.r0.3.1.sites.vep_chr19_9-10.vcf.recode.vcf.gz.tbi

inst/extdata/UCSC_hg19_chr9_9-10_refSeq_160702.txt

inst/extdata/All_20160601_chr19_9-10.vcf.recode.vcf.gz

RareVariantVis documentation built on Nov. 8, 2020, 11:08 p.m.