SANTA: Spatial Analysis of Network Associations

This package provides methods for measuring the strength of association between a network and a phenotype. It does this by measuring clustering of the phenotype across the network (Knet). Vertices can also be individually ranked by their strength of association with high-weight vertices (Knode).

Getting started

Package details

AuthorAlex J. Cornish and Florian Markowetz
Bioconductor views Clustering Network NetworkEnrichment
MaintainerAlex J. Cornish <>
LicenseGPL (>= 2)
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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SANTA documentation built on Oct. 31, 2019, 3:21 a.m.