API for SBGNview
"SBGNview: Data Analysis, Integration and Visualization on SBGN Pathways"
| Global functions | |
|---|---|
| +.SBGNview | Man page |
| .onLoad | Source code |
| SBGNhub.id.mapping.tables | Man page |
| SBGNview | Man page Source code |
| add.omics.data.to.glyph | Source code |
| add.stamp | Source code |
| arc-class | Man page |
| break.text.into.segments | Source code |
| change.glyph.id | Source code |
| change.id | Source code |
| changeDataId | Man page Source code |
| changeIds | Man page Source code |
| color.from.value | Source code |
| color.panel | Source code |
| createSBGNviewObject | Source code |
| download.mapping.file | Source code |
| downloadSbgnFile | Man page Source code |
| filter.pathways.by.org | Source code |
| find.arc.coordinates | Source code |
| find.col.panel.position.and.plot | Source code |
| find.col.panel.range | Source code |
| find.key.pos | Source code |
| find.max.xy | Source code |
| find.pathways.by.keywords | Source code |
| findPathways | Man page Source code |
| geneannot.map.ko | Source code |
| generate.cpd.mapping.table | Source code |
| generate.d.for.partly.rounded.corner.rect | Source code |
| generate.glyph.id | Source code |
| generate.ko.mapping.list | Source code |
| generate.node.obj | Source code |
| generate.user.data | Source code |
| get.all.nodes.info | Source code |
| get.arc.segments | Source code |
| get.arcs | Source code |
| get.arcs.info | Source code |
| get.compartment.layer | Source code |
| get.entity.parameter.list | Source code |
| get.keggrest.data | Source code |
| get.spline.compo | Source code |
| glyph-class | Man page |
| highlight.edges | Source code |
| highlight.nodes.each.sbgn | Source code |
| highlight.path.each.sbgn | Source code |
| highlightArcs | Man page Source code |
| highlightNodes | Man page Source code |
| highlightPath | Man page Source code |
| load.all.ids.mapping | Source code |
| load.id.mapping.list.all | Source code |
| loadMappingTable | Man page Source code |
| mapped.ids | Man page |
| mapping.ko.to.arbitrary.id.type | Source code |
| match.names | Source code |
| mol.sum.multiple.mapping | Source code |
| node.ids.from.sbgn | Source code |
| outputFile | Man page Source code |
| outputFile<- | Man page |
| parse.arcs | Source code |
| parse.glyph | Source code |
| parse.glyph.children | Source code |
| parse.input.sbgn | Source code |
| parse.omics.data | Source code |
| parse.splines | Source code |
| pathways.info | Man page |
| pathways.stats | Man page |
| plot.LineWings | Source code |
| plot.arc.ports | Source code |
| plot.ellipse | Source code |
| plot.ellipse.edge.tip | Source code |
| plot.line | Source code |
| plot.path | Source code |
| plot.polygon | Source code |
| plot.rectangle | Source code |
| plot.text | Source code |
| print.SBGNview | Man page |
| renderSbgn | Man page Source code |
| sbgn.gsets | Man page Source code |
| sbgnNodes | Man page Source code |
| search.sbgnhub.id.mapping | Source code |
| shortest.path.from.arcs | Source code |
| simulate.user.data | Source code |
| spline.arc-class | Man page |
| xml.to.port.glyphs | Source code |
