print.SBGNview: Generate image files

Description Usage Arguments Value Examples

Description

A wrapper to run function renderSbgn for all pathways in a SBGNview object and generate image files.

Usage

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## S3 method for class 'SBGNview'
print(x, ...)

Arguments

x

A SBGNview class object.

...

Other parameters passed to print.

Value

None

Examples

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### Use simulated data. Please see vignettes for more examples.
### Run `browseVignettes(package = "SBGNview")`
data('pathways.info','sbgn.xmls')
SBGNview.obj = SBGNview(simulate.data = TRUE,
                        sbgn.dir = './',
                        input.sbgn = 'P00001',
                        output.file = './test.local.file',
                        output.formats = c('pdf'),
                        min.gene.value = -1,
                        max.gene.value = 1)
 print(SBGNview.obj)

SBGNview documentation built on March 3, 2021, 2 a.m.