Man pages for SIMAT
GC-SIM-MS data processing and alaysis tool
| getEIC | Get the EIC of a peak |
| getPeak | Get all peaks corresponding to targets in several runs |
| getPeakScore | Calculate the similarity score for all peaks |
| getRI | Generate a calibration function |
| getRIStandard | Get the RI standard information |
| getScore | Calculate similarity score for a peak |
| getTarget | Get target information |
| getTargetTable | Get target table information |
| Library | Extracted compound information from an MSL library. |
| optFrag | Fragment selection through optimization |
| plotEIC | Plotting EIC of one peak |
| plotTIC | Plotting TIC of one run |
| putTargetTable | Put target table information |
| readCDF | Read raw mass spectrometry data in netCDF files |
| readMSL | Read mass spectral library (MSL) files |
| RItable | Extracted RI standard information from a 'csv' file. |
| Run | Extracted peaks from one SIM run. |
| SIMAT-package | This package is for processing GC-SIM-MS data |
| Targets | Targets information in a list. |
| target.table | Extracted target information from a 'csv' file. |
| writeMSL | Write targets information into a file with mass spectral... |
| writeResult | Write analysis results to file. |
