General Sample Size and Power Analysis for Microarray and Next-Generation Sequencing Data

cornerLcurve | Find corner L-curve |

cornerScurve | Find corner S-curve |

dbitri | Density function for a bi-triangular random variable. |

deconvolution | deconvolution estimator using fft |

deepSAGE | Test statistics derived from a deepSAGE experiment |

defineEffectSizeRange | defineEffectSizeRange |

findroot | bisection method for finding ustar |

midpoint | Midpoint rule for numerical integration. |

nncg | Non-negative conjugate gradient algorithm |

Nutrigenomics | Test statistics from a Nutrigenomics gene expression... |

pbitri | Distribution function for a bi-triangular random variable. |

picardplot | Picard-plot |

pilotData | User friendly interface to class "PilotData" |

predictpower | Predict power for given vector of sample sizes |

qbitri | Quantile function for a bi-triangular random variable. |

rbitri | Random generation of bitriangular distributed values. |

regularization | Find optimal regularization parameter |

sampleSize | User friendly interface to class 'SampleSize' |

show-methods | General show method for Classes PilotData and SampleSize |

simdat | Generate simulated microarray data using the bitriangular... |

simpson | Simpson's rule for numrical integration. |

standardform | Transform to standard from |

tikhonov | Tikhonov regularization |

trapezoidal | Trapezoidal rule for numrical integration. |

trimbin | Binning and trimming of the test statistics vector. |

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