Coverage matrix across CDKN2A gene locus
A dataset containing read depths for 179 lung squamous cell carcinoma samples across the CDKN2A locus.
A 2078 x 179
data.frame of read depth (coverage). Each
column corresponds to a sample and each row to a base position along the
CDKN2A locus. These RNA-Seq read counts are a subset from 179 lung squamous
cell tumor samples sequenced as part of the Cancer Genome Atlas.
The Cancer Genome Atlas Research Network. (2012) Comprehensive genomic characterization of squamous cell lung cancers. Nature 489: 519-525.