patients.plot: patients.plot

In SparseSignatures: SparseSignatures

Description

Plot trinucleotides counts for a set of given patients.

Usage

patients.plot(
  trinucleotides_counts,
  samples = rownames(trinucleotides_counts),
  freq = FALSE,
  xlabels = FALSE
)

Arguments

trinucleotides_counts	trinucleotides counts matrix.
samples	name of the samples. This should match a rownames in trinucleotides_counts.
freq	boolean value; shall I display rates instead of counts?
xlabels	boolean value; shall I display x labels?

Value

A ggplot2 object.

Examples

data(patients)
patients.plot(trinucleotides_counts=patients,samples=c("PD10010a","PD10011a","PD10014a"))

SparseSignatures documentation built on Nov. 8, 2020, 4:55 p.m.