performanceMetrics: Get performance metrics in SummarizedBenchmark object
In SummarizedBenchmark: Classes and methods for performing benchmark comparisons
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Given a SummarizedBenchmark object,
returns a list of lists of performance metrics that have been defined for
each assay. Optionally, if assay = is specified, performance metrics
for only the specified subset of specified assays are returned.
Usage
1
2
3
4
performanceMetrics(object, ...)
## S4 method for signature 'SummarizedBenchmark'
performanceMetrics(object, assay = NULL)
Arguments
object
a SummarizedBenchmark object.
...
futher arguments, perhaps used by methods.
assay
a character string indicating an assay name.
Value
A SimpleList with one element for each assay. Each element of the list contains a list of performance metric functions.
Author(s)
Alejandro Reyes
See Also
addPerformanceMetric, estimatePerformanceMetrics
Examples
1
2
3
data(sb)
performanceMetrics(sb)
performanceMetrics(sb, assay = "qvalue")
SummarizedBenchmark documentation built on Nov. 8, 2020, 8:30 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Given a SummarizedBenchmark object,
returns a list of lists of performance metrics that have been defined for
each assay. Optionally, if assay = is specified, performance metrics
for only the specified subset of specified assays are returned.
Usage
1 2 3 4 | performanceMetrics(object, ...)
## S4 method for signature 'SummarizedBenchmark'
performanceMetrics(object, assay = NULL)
|
Arguments
object |
a |
... |
futher arguments, perhaps used by methods. |
assay |
a character string indicating an assay name. |
Value
A SimpleList with one element for each assay. Each element of the list contains a list of performance metric functions.
Author(s)
Alejandro Reyes
See Also
addPerformanceMetric, estimatePerformanceMetrics
Examples
1 2 3 | data(sb)
performanceMetrics(sb)
performanceMetrics(sb, assay = "qvalue")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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