API for TEQC
Quality control for target capture experiments
| Global functions | |
|---|---|
| .coverage.hist | Source code |
| .onAttach | Source code |
| TEQCreport | Man page Source code |
| chrom.barplot | Man page Source code |
| cortext | Source code |
| covBoxplot | Source code |
| covcorplot | Source code |
| coverage.GC | Man page Source code |
| coverage.correlation | Man page Source code |
| coverage.density | Man page Source code |
| coverage.hist | Man page Source code |
| coverage.plot | Man page Source code |
| coverage.target | Man page Source code |
| coverage.targetlength.plot | Man page Source code |
| coverage.uniformity | Man page Source code |
| covered.k | Man page Source code |
| covplot | Source code |
| duplicates.barplot | Man page Source code |
| fraction.reads.target | Man page Source code |
| fraction.target | Man page Source code |
| get.baits | Man page Source code |
| get.reads | Man page Source code |
| get.targets | Man page Source code |
| htmlChromBarplot | Source code |
| htmlCovBoxplot | Source code |
| htmlCovCorrelationPlot | Source code |
| htmlCovGC | Source code |
| htmlCovTargetLength | Source code |
| htmlCovUniformity | Source code |
| htmlCoverageHist | Source code |
| htmlDuplicatesBarplot | Source code |
| htmlInsertSizeHist | Source code |
| htmlSensiBarplot | Source code |
| htmlSpeciBarplot | Source code |
| htmlUniformityPlot | Source code |
| html_img | Source code |
| insert.size.hist | Man page Source code |
| make.multi.report | Source code |
| make.report | Source code |
| make.wigfiles | Man page Source code |
| multiTEQCreport | Man page Source code |
| myreduce | Source code |
| offsetfun | Source code |
| plot.i | Source code |
| reads2pairs | Man page |
| readsPerTarget | Man page Source code |
| sensiBarplot | Source code |
| speciBarplot | Source code |
| unifplot | Source code |
