Files in TEQC
Quality control for target capture experiments

DESCRIPTION
NEWS
NAMESPACE
R/coverage.density.R R/duplicates.barplot.R R/TEQCreport.R R/offsetfun.R R/make.wigfiles.R R/readsPerTarget.R R/coverage.correlation.R R/fraction.target.R R/insert.size.hist.R R/get.baits.R R/chrom.barplot.R R/reads2pairs.R R/coverage.GC.R R/zzz.R R/coverage.target.R R/get.targets.R R/coverage.plot.R R/multiTEQCreport.R R/get.reads.R R/coverage.uniformity.R R/coverage.hist.R R/myreduce.R R/coverage.targetlength.plot.R R/covered.k.R R/fraction.reads.target.R man/TEQCreport.Rd man/coverage.target.Rd man/get.baits.Rd man/coverage.hist.Rd man/covered.k.Rd man/reads2pairs.Rd man/coverage.density.Rd man/coverage.plot.Rd man/make.wigfiles.Rd man/insert.size.hist.Rd man/fraction.target.Rd man/get.reads.Rd man/fraction.reads.target.Rd man/get.targets.Rd man/coverage.targetlength.plot.Rd man/multiTEQCreport.Rd man/readsPerTarget.Rd man/chrom.barplot.Rd man/duplicates.barplot.Rd man/coverage.GC.Rd man/coverage.uniformity.Rd man/coverage.correlation.Rd
vignettes/TEQC.Rnw
build/vignette.rds
inst/CITATION
inst/extdata/ExampleSet_Reads.bed
inst/extdata/ExampleSet_Baits.txt
inst/extdata/ExampleSet_Targets.bed
inst/doc/TEQC.R inst/doc/TEQC.pdf
inst/doc/TEQC.Rnw
inst/templateMulti/6000-Correlation.html
inst/templateMulti/0000-Header.html
inst/templateMulti/9999-Footer.html
inst/templateMulti/4000-Sensitivity.html
inst/templateMulti/5000-Uniformity.html
inst/templateMulti/3000-TargetCoverage.html
inst/templateMulti/2000-Specificity.html
inst/templateMulti/1000-Overview.html
inst/template/1001-Pairedend.html
inst/template/5000-CoverageLength.html
inst/template/QA.css
inst/template/3000-Coverage.html
inst/template/4000-CoverageUniformity.html
inst/template/7000-Wiggle.html
inst/template/1000-Overview.html
inst/template/2001-SpeciEnrichment.html
inst/template/6000-CoverageGC.html
inst/template/8000-Duplicates.html
inst/template/8001-Duplicates.html
inst/template/0000-Header.html
inst/template/2000-SpeciEnrichment.html
inst/template/9999-Footer.html
inst/template/image/bioclogo-small.jpg
TEQC documentation built on Nov. 17, 2017, 8:57 a.m.