getFilterAssayData: Retrieve the assay matrix of gene expression data
In TReNA: Fit transcriptional regulatory networks using gene expression, priors, machine learning
Description
Usage
Arguments
Value
Examples
Description
Retrieve the assay matrix of gene expression data
Usage
1
getFilterAssayData(obj)
Arguments
obj
An object of a CandidateFilter class
Value
The assay matrix of gene expression data associated with a CandidateFilter object
Examples
1
2
3
4
# Create a CandidateFilter object using the included Alzheimer's data and retrieve the matrix
load(system.file(package="TReNA", "extdata/ampAD.154genes.mef2cTFs.278samples.RData"))
my.filter <- CandidateFilter(mtx.sub)
mtx <- getFilterAssayData(my.filter)
TReNA documentation built on Nov. 17, 2017, 12:35 p.m.
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Description Usage Arguments Value Examples
Description
Retrieve the assay matrix of gene expression data
Usage
1 | getFilterAssayData(obj)
|
Arguments
obj |
An object of a CandidateFilter class |
Value
The assay matrix of gene expression data associated with a CandidateFilter object
Examples
1 2 3 4 | # Create a CandidateFilter object using the included Alzheimer's data and retrieve the matrix
load(system.file(package="TReNA", "extdata/ampAD.154genes.mef2cTFs.278samples.RData"))
my.filter <- CandidateFilter(mtx.sub)
mtx <- getFilterAssayData(my.filter)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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