TTMap: Two-Tier Mapper: a clustering tool based on topological data analysis

TTMap is a clustering method that groups together samples with the same deviation in comparison to a control group. It is specially useful when the data is small. It is parameter free.

Package details

AuthorRachel Jeitziner
Bioconductor views Classification Clustering DifferentialExpression Microarray MultipleComparison Software
MaintainerRachel Jeitziner <rachel.jeitziner@epfl.ch>
LicenseGPL-2
Version1.12.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("TTMap")

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TTMap documentation built on Nov. 8, 2020, 7:30 p.m.