API for TTMap
Two-Tier Mapper: a clustering tool based on topological data analysis
| Global functions | |
|---|---|
| FLAT_hda2 | Source code |
| TTMap | Man page |
| TTMap-package | Man page |
| annot_right | Source code |
| calcul_e | Man page Source code |
| calcul_e_single | Man page Source code |
| control_adjustment | Man page Source code |
| create_colors | Source code |
| create_links | Source code |
| create_places | Source code |
| cutoff_low | Source code |
| deviation_hda2 | Source code |
| f1prime | Source code |
| f1prime2 | Source code |
| f1prime3 | Source code |
| generate_correlation | Man page Source code |
| generate_euclidean | Man page Source code |
| generate_mismatch_distance | Man page Source code |
| generate_p_val_correlation | Man page Source code |
| generate_single_cell_complete_mismatch | Man page Source code |
| generate_single_cell_mismatch_with_parameter | Man page Source code |
| hyperrectangle_deviation_assessment | Man page Source code |
| impute_median | Source code |
| make_matrices | Man page |
| make_matrices,ExpressionSet-method | Man page |
| make_matrices,RangedSummarizedExperiment-method | Man page |
| make_matrices,SummarizedExperiment-method | Man page |
| make_matrices,data.frame-method | Man page |
| make_matrices,matrix-method | Man page |
| make_matrices-methods | Man page |
| mapper1 | Source code |
| mat2pcl | Man page Source code |
| mat_1_0 | Source code |
| mat_d | Source code |
| mat_d_col | Source code |
| meshRows_hda | Source code |
| meshRows_norm_hda | Source code |
| normal_hda2 | Source code |
| read_pcl | Man page Source code |
| ttmap | Man page Source code |
| ttmap_sgn_genes | Man page Source code |
| ttmap_sgn_genes_inter | Man page Source code |
| ttmap_sgn_genes_inter2 | Man page Source code |
| write_pcl | Man page Source code |
