Files in ToxicoGx
Analysis of Large-Scale Toxico-Genomic Data
LICENSE
NEWS.md
NAMESPACE
DESCRIPTION
README.md
R/methods-pertNumber.R
R/allGenerics.R
R/drugGeneResponseCurve.R
R/paramMissingHandler.R
R/methods-sensNumber.R
R/methods-cellInfo.R
R/methods-drugNames.R
R/methods-subsetTo.R
R/geneDrugSensitivity.R
R/geneDrugPerturbation.R
R/methods-molecularProfilesSlot.R
R/methods-name.R
R/summarizeSensitivityProfiles.R
R/computeAUC.R
R/methods-drugInfo.R
R/updateDrugId.R
R/methods-dateCreated.R
R/methods-featureInfo.R
R/paramErrorChecker.R
R/methods-fNames.R
R/methods-datasetType.R
R/drugTimeResponseCurve.R
R/paramMissingHandlerTests.R
R/methods-sensitivityMeasures.R
R/class-ToxicoSet.R
R/methods-molecularProfiles.R
R/downloadTSet.R
R/methods-sensitivityProfiles.R
R/methods-phenoInfo.R
R/utilities.R
R/rankGeneDrugPerturbation.R
R/summarizeMolecularProfiles.R
R/columnsAsCharacter.R
R/dataset.R
R/drugPerturbationSig.R
R/globals.R
R/methods-sensitivitySlot.R
R/methods-curation.R
R/SanityCheck.R
R/methods-annotation.R
R/methods-mDataNames.R
R/computeDrugSensitivity.R
R/updateCellId.R
R/class-signature.R
R/computeICn.R
R/zzz.R
R/LogLogisticRegression.R
R/methods-sensitivityInfo.R
R/computeIC50.R
R/methods-computeLimmaDiffExpr.R
R/methods-cellNames.R
R/methods-sensitivityRaw.R
R/rankGeneDrugSensitivity.R
man/drugNames-set.Rd
man/sub-ToxicoSet-ANY-ANY-ANY-method.Rd
man/annotation-set.Rd
man/sensitivitySlot-set.Rd
man/dim-ToxicoSet-method.Rd
man/curation.Rd
man/summarizeMolecularProfiles.Rd
man/mDataNames-ToxicoSet-method.Rd
man/computeLimmaDiffExpr-ToxicoSet-method.Rd
man/HCC_sig.Rd
man/show-ToxicoSig-method.Rd
man/ToxicoSet.Rd
man/computeICn.Rd
man/drugInfo-set.Rd
man/drugNames.Rd
man/summarizeSensitivityProfiles.Rd
man/computeAUC.Rd
man/showSigAnnot.Rd
man/show-ToxicoSet-method.Rd
man/datasetType.Rd
man/TGGATESsmall.Rd
man/sensitivityRaw.Rd
man/subsetTo.Rd
man/annotation.Rd
man/availableTSets.Rd
man/updateDrugId.Rd
man/checkTSetStructure.Rd
man/drugTimeResponseCurve.Rd
man/ToxicoSet-class.Rd
man/computeLimmaDiffExpr.Rd
man/datasetType-set.Rd
man/geneDrugPerturbation.Rd
man/drugInfo.Rd
man/ToxicoSig.Rd
man/name-ToxicoSet-method.Rd
man/sensitivitySlot.Rd
man/logLogisticRegression.Rd
man/drugGeneResponseCurve.Rd
man/sensitivityRaw-set.Rd
man/downloadTSet.Rd
man/drugPerturbationSig.Rd
man/updateCellId.Rd
man/curation-set.Rd
inst/doc/toxicoGxCaseStudies.Rmd
inst/doc/toxicoGxCaseStudies.html
inst/doc/toxicoGxCaseStudies.R
data/HCC_sig.rda
data/TGGATESsmall.rda
build/vignette.rds
vignettes/toxicoGxCaseStudies.Rmd
vignettes/CS1_published.png
