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R/VariantExperiment-package.R
In VariantExperiment: A RangedSummarizedExperiment Container for VCF/GDS Data with GDS Backend
#' VariantExperiment: A package to represent VCF / GDS files using standard SummarizedExperiment metaphor with on-disk representation.
#' @description The package \code{VariantExperiment} takes GDS file or VCF file as input, and save them in VariantExperiment object. Assay data are saved in \code{GDSArray} objects and annotation data are saved in \code{DelayedDataFrame} format, both of which remain on-disk until needed. Common manipulations like subsetting, mathematical transformation and statistical analysis are done easily and quickly in _R_.
#' @docType package
#' @name VariantExperiment-package
#' @rdname VariantExperiment-package
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VariantExperiment documentation built on April 10, 2021, 6 p.m.
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#' VariantExperiment: A package to represent VCF / GDS files using standard SummarizedExperiment metaphor with on-disk representation.
#' @description The package \code{VariantExperiment} takes GDS file or VCF file as input, and save them in VariantExperiment object. Assay data are saved in \code{GDSArray} objects and annotation data are saved in \code{DelayedDataFrame} format, both of which remain on-disk until needed. Common manipulations like subsetting, mathematical transformation and statistical analysis are done easily and quickly in _R_.
#' @docType package
#' @name VariantExperiment-package
#' @rdname VariantExperiment-package
NULL
Try the VariantExperiment package in your browser
Any scripts or data that you put into this service are public.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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