Files in VariantFiltering
Filtering of coding and non-coding genetic variants

NEWS
DESCRIPTION
NAMESPACE
inst/CITATION
inst/unitTests/test_location-methods.R inst/unitTests/test_VariantFilteringParam-methods.R inst/unitTests/test_inheritance-models.R inst/doc/usingVariantFiltering.pdf inst/doc/usingVariantFiltering.R
inst/doc/usingVariantFiltering.Rnw
inst/shinyApp/server.R inst/shinyApp/ui.R
inst/extdata/humanEnsGenePhylostrata.rda
inst/extdata/NA12878.subset.bam.bai
inst/extdata/sequence_variant.gSOXPapril2016.rds
inst/extdata/NA12878.subset.bam
inst/extdata/hsap.donors.hcmc10_15_1.ibn
inst/extdata/CEUtrio.ped
inst/extdata/NA12892.subset.bam
inst/extdata/uind.rds
inst/extdata/AA_chemical_properties_HanadaGojoboriLi2006.tsv
inst/extdata/CEUtrio.vcf.bgz
inst/extdata/humanCodonUsage.txt
inst/extdata/NA12892.subset.bam.bai
inst/extdata/README_SequenceOntology
inst/extdata/README_humanGenesPhylostrata
inst/extdata/NA12891.subset.bam
inst/extdata/CEUtrio.vcf.bgz.tbi
inst/extdata/hsap.acceptors.hcmc10_15_1.ibn
inst/extdata/NA12891.subset.bam.bai
vignettes/shinysnapshotVariantFiltering.jpg
vignettes/usingVariantFiltering.Rnw
R/autosomalRecessiveHeterozygous.R R/zzz.R R/methods-ShinyApp.R R/methods-CutoffsList.R R/methods-Visualization.R R/unrelatedIndividuals.R R/tabPanelAbout.R R/AllClasses.R R/methods-VariantFilteringResults.R R/xLinked.R R/annotationEngine.R R/autosomalRecessiveHomozygous.R R/autosomalDominant.R R/deNovo.R R/AllGeneric.R R/methods-GenePhyloStrataDb.R R/methods-VariantType-class.R R/methods-SequenceOntology.R R/methods-VariantFilteringParam.R R/defaultFilters.R R/methods-WeightMatrix.R R/scoreBindingSiteVariants.R R/methods-locateVariants.R R/AllUtilities.R R/methods-deprecated.R
src/VariantFiltering.h
src/Biostrings_stubs.c
src/methods-WeightMatrix.c
src/R_init_VariantFiltering.c
man/readAAradicalChangeMatrix.Rd man/VariantFiltering-package.Rd man/VariantFiltering-defunct.Rd man/xLinked.Rd man/autosomalRecessiveHeterozygous.Rd man/VariantType-class.Rd man/autosomalDominant.Rd man/VariantFilteringParam-class.Rd man/autosomalRecessiveHomozygous.Rd man/WeightMatrix-class.Rd man/VariantFiltering-deprecated.Rd man/VariantFilteringResults-class.Rd man/GenePhylostrataDb-class.Rd man/deNovo.Rd man/unrelatedIndividuals.Rd
build/vignette.rds
tests/runTests.R
VariantFiltering documentation built on May 2, 2018, 6:04 p.m.