Vega: An R package for copy number data segmentation
Version 1.24.0

Vega (Variational Estimator for Genomic Aberrations) is an algorithm that adapts a very popular variational model (Mumford and Shah) used in image segmentation so that chromosomal aberrant regions can be efficiently detected.

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AuthorSandro Morganella
Bioconductor views CopyNumberVariation aCGH
Date of publicationNone
MaintainerSandro Morganella <sandro@ebi.ac.uk>
LicenseGPL-2
Version1.24.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("Vega")

Man pages

G519: Granta-519 Data
plotSegmentation: Plot observations and the respective segmentation.
vega: This function computes, saves and returns the copy number...
Vega-package: An R package for copy number data segmentation

Functions

G519 Man page
Vega Man page
Vega-package Man page
plotSegmentation Man page Source code
vega Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/plotSegmentation.R
R/vega.R
build
build/vignette.rds
data
data/G519.RData
inst
inst/doc
inst/doc/Vega.R
inst/doc/Vega.Rnw
inst/doc/Vega.pdf
man
man/G519.Rd
man/Vega-package.Rd
man/plotSegmentation.Rd
man/vega.Rd
src
src/vega.c
vignettes
vignettes/Vega.Rnw
Vega documentation built on May 20, 2017, 10:10 p.m.