Vega: An R package for copy number data segmentation

Vega (Variational Estimator for Genomic Aberrations) is an algorithm that adapts a very popular variational model (Mumford and Shah) used in image segmentation so that chromosomal aberrant regions can be efficiently detected.

Package details

AuthorSandro Morganella
Bioconductor views CopyNumberVariation aCGH
MaintainerSandro Morganella <sandro@ebi.ac.uk>
LicenseGPL-2
Version1.35.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Vega")

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Vega documentation built on April 28, 2020, 8:45 p.m.