Man pages for XCIR

addAnnoRead annotation file
betaBinomXIFit mixture model
BetaConversionConverting beta distribution parameters
consensusXCIXCI consensus
getGenicDPGet expression at the gene level
getXCIstateClassify X-genes
mart_genesbiomaRt genes
plotBBCellFracPlot cell fraction estimates
plotQCPlot QC
readRNASNPsRead SNPs from RNA-Seq
readVCF4Read VCF file
readXCIRead a list of known inactivated genes
sample_cleanSample estimates
XCIR-packageEstimating inactivated X chromosome expression
XCIR documentation built on Nov. 8, 2020, 7:41 p.m.