mart_genes: biomaRt genes
In XCIR: XCI-inference
Description
Usage
Arguments
Value
Examples
Description
Extract gene informations from biomaRt
Usage
1
mart_genes(release = "hg19", chr = "X")
Arguments
release
A character. Genome release name. Valid releases are
"hg19", "hg38".
chr
A character or NULL. If specified, only the genes
from the specified chromosomes will be returned.
Value
A data.table with the gene symbol, start and end position
and matching ensembl transcripts.
Examples
1
2
3
4
#Chromosome X, hg19
egX <- mart_genes()
#Full genome, latest release
eg <- mart_genes("hg38")
XCIR documentation built on Nov. 8, 2020, 7:41 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Extract gene informations from biomaRt
Usage
1 | mart_genes(release = "hg19", chr = "X")
|
Arguments
release |
A |
chr |
A |
Value
A data.table with the gene symbol, start and end position
and matching ensembl transcripts.
Examples
1 2 3 4 | #Chromosome X, hg19
egX <- mart_genes()
#Full genome, latest release
eg <- mart_genes("hg38")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.