read.celfile: Read a CEL file into an R list
In affyio: Tools for parsing Affymetrix data files
Description
Usage
Arguments
Details
Value
Author(s)
Description
This function reads the entire contents of a CEL file into
an R list structure
Usage
1
read.celfile(filename,intensity.means.only=FALSE)
Arguments
filename
name of CEL file
intensity.means.only
If TRUE then read on only the MEAN section in INTENSITY
Details
The list has four main items. HEADER, INTENSITY, MASKS, OUTLIERS. Note
that INTENSITY is a list of three vectors MEAN, STDEV, NPIXELS. HEADER
is also a list. Both of MASKS and OUTLIERS are matrices.
Value
returns a list structure. The exact contents may vary
depending on the file format of the CEL file
Author(s)
B. M. Bolstad <bmb@bmbolstad.com>
affyio documentation built on Nov. 8, 2020, 6:53 p.m.
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Description Usage Arguments Details Value Author(s)
Description
This function reads the entire contents of a CEL file into an R list structure
Usage
1 | read.celfile(filename,intensity.means.only=FALSE)
|
Arguments
filename |
name of CEL file |
intensity.means.only |
If |
Details
The list has four main items. HEADER, INTENSITY, MASKS, OUTLIERS. Note that INTENSITY is a list of three vectors MEAN, STDEV, NPIXELS. HEADER is also a list. Both of MASKS and OUTLIERS are matrices.
Value
returns a list structure. The exact contents may vary
depending on the file format of the CEL file
Author(s)
B. M. Bolstad <bmb@bmbolstad.com>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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