Man pages for anamiR
An integrated analysis package of miRNA and mRNA expression data
| anamiR | anamiR: An integrated analysis package of miRNA and mRNA... |
| database_support | Intersect with databases for potential miRNA-target gene... |
| differExp_continuous | Find differential expression genes or miRNAs from given... |
| differExp_discrete | Find differential expression genes or miRNAs from given... |
| egSymb | A table with information of gene symbol and gene ID |
| enrichment | Enrich pathways with genes from putative miRNA-target gene... |
| GSEA_ana | This function will do function driven analysis. |
| GSEA_res | Pipeline of anamiR is applied to given output from GSEA_ana. |
| heat_vis | Using correlation information to draw a heatmaps |
| miR_converter | Convert miRNA annotation to the miRBase 21 version |
| mirna | miRNA expression data about breast cancer |
| mrna | mRNA expression data about breast cancer |
| msigdb.gs | MsigDB C2 pathways with gene set information |
| multi_Differ | Find differential expression groups of each genes or miRNA... |
| negative_cor | Find the correlation coefficient between each gene and miRNA. |
| normalization | Normalize expression data |
| pheno.mirna | phenotype data of 'mirna' about breast cancer |
| pheno.mrna | phenotype data of 'mrna' about breast cancer |
| table_pre | A list with information of genes and miRNAs. |
