Man pages for anamiR
An integrated analysis package of miRNA and mRNA expression data

anamiRanamiR: An integrated analysis package of miRNA and mRNA...
database_supportIntersect with databases for potential miRNA-target gene...
differExp_continuousFind differential expression genes or miRNAs from given...
differExp_discreteFind differential expression genes or miRNAs from given...
egSymbA table with information of gene symbol and gene ID
enrichmentEnrich pathways with genes from putative miRNA-target gene...
GSEA_anaThis function will do function driven analysis.
GSEA_resPipeline of anamiR is applied to given output from GSEA_ana.
heat_visUsing correlation information to draw a heatmaps
miR_converterConvert miRNA annotation to the miRBase 21 version
mirnamiRNA expression data about breast cancer
mrnamRNA expression data about breast cancer
msigdb.gsMsigDB C2 pathways with gene set information
multi_DifferFind differential expression groups of each genes or miRNA...
negative_corFind the correlation coefficient between each gene and miRNA.
normalizationNormalize expression data
pheno.mirnaphenotype data of 'mirna' about breast cancer
pheno.mrnaphenotype data of 'mrna' about breast cancer
table_preA list with information of genes and miRNAs.
anamiR documentation built on Nov. 27, 2017, 2:03 a.m.