hammer: ExpressionSet results from Hammer et al 2010
In biobroom: Turn Bioconductor objects into tidy data frames
Description
Usage
Format
Value
Description
An ExpressionSet containing the results of the Hammer et al
2010 RNA-Seq study on the nervous system of rats (Hammer et al 2010).
This was downloaded from the ReCount database of analysis-ready RNA-Seq
datasets (Frazee et al 2011).
Hammer, P., Banck, M. S., Amberg, R., Wang, C., Petznick, G., Luo, S.,
Khrebtukova, I., Schroth, G. P., Beyerlein, P., and Beutler, A. S. (2010).
mRNA-seq with agnostic splice site discovery for nervous system
transcriptomics tested in chronic pain. Genome research, 20(6), 847-860.
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2877581/
Frazee, A. C., Langmead, B., and Leek, J. T. (2011). ReCount: a
multi-experiment resource of analysis-ready RNA-seq gene count datasets.
BMC Bioinformatics, 12, 449. http://bowtie-bio.sourceforge.net/recount/
Usage
1
Format
An object of class ExpressionSet with 29516 rows and 8 columns.
Value
ExpressionSet
biobroom documentation built on Nov. 8, 2020, 5:20 p.m.
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Description Usage Format Value
Description
An ExpressionSet containing the results of the Hammer et al 2010 RNA-Seq study on the nervous system of rats (Hammer et al 2010).
This was downloaded from the ReCount database of analysis-ready RNA-Seq datasets (Frazee et al 2011).
Hammer, P., Banck, M. S., Amberg, R., Wang, C., Petznick, G., Luo, S., Khrebtukova, I., Schroth, G. P., Beyerlein, P., and Beutler, A. S. (2010). mRNA-seq with agnostic splice site discovery for nervous system transcriptomics tested in chronic pain. Genome research, 20(6), 847-860. http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2877581/
Frazee, A. C., Langmead, B., and Leek, J. T. (2011). ReCount: a multi-experiment resource of analysis-ready RNA-seq gene count datasets. BMC Bioinformatics, 12, 449. http://bowtie-bio.sourceforge.net/recount/
Usage
1 |
Format
An object of class ExpressionSet with 29516 rows and 8 columns.
Value
ExpressionSet
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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