exonsToIntrons: Convert exon annotation GRanges to intron locations
In branchpointer: Prediction of intronic splicing branchpoints

Description Usage Arguments Value Author(s)

Converts exon annotation to intron locations overlapping the branchpoint region for exculsion of non-branchpoint region SNPs Returns a character vector of chromosome locations

1	exonsToIntrons(exons, maxDist = 50)

`exons`	GRanges containing exon co-ordinates. Should be produced by gtfToExons()
`maxDist`	Maximum distance from the 3' exon to create the branchpoint region.

GRanges containing intron window co-ordinates

Beth Signal

branchpointer documentation built on Nov. 8, 2020, 6:16 p.m.