ccmap: Combination Connectivity Mapping

Finds drugs and drug combinations that are predicted to reverse or mimic gene expression signatures. These drugs might reverse diseases or mimic healthy lifestyles.

AuthorAlex Pickering
Date of publicationNone
MaintainerAlex Pickering <alexvpickering@gmail.com>
LicenseMIT + file LICENSE
Version1.0.0

View on Bioconductor

Files

ccmap/DESCRIPTION
ccmap/LICENSE
ccmap/NAMESPACE
ccmap/R
ccmap/R/predict_combos.R ccmap/R/query_combos.R ccmap/R/query_drugs.R ccmap/R/query_utils.R
ccmap/README.md
ccmap/build
ccmap/build/vignette.rds
ccmap/inst
ccmap/inst/doc
ccmap/inst/doc/ccmap-vignette.R
ccmap/inst/doc/ccmap-vignette.Rmd
ccmap/inst/doc/ccmap-vignette.html
ccmap/man
ccmap/man/get_dprimes.Rd ccmap/man/query_combos.Rd ccmap/man/query_drugs.Rd ccmap/man/sum_rowcolCumsum.Rd
ccmap/tests
ccmap/tests/testthat
ccmap/tests/testthat.R
ccmap/tests/testthat/test-all.R
ccmap/vignettes
ccmap/vignettes/accuracy.png
ccmap/vignettes/ccmap-vignette.Rmd
ccmap/vignettes/meta-vs-cons.png

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.