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After the clustering step of a single-cell RNAseq experiment, this package aims to suggest labels/cell types for the clusters, on the basis of similarity to a reference dataset. It requires a table of read counts per cell per gene, and a list of the cells belonging to each of the clusters, (for both test and reference data).
Package details |
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Author | Sarah Williams [aut, cre] |
Bioconductor views | SingleCell |
Maintainer | Sarah Williams <sarah.williams1@monash.edu> |
License | GPL-3 |
Version | 1.8.0 |
Package repository | View on Bioconductor |
Installation |
Install the latest version of this package by entering the following in R:
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