make_ref_similarity_names_for_group: make_ref_similarity_names_for_group

Description Usage Arguments Value See Also

View source: R/group_labelling_functions.r

Description

Internal function, called by make_ref_similarity_names_using_marked for each group.

Usage

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make_ref_similarity_names_for_group(the_test_group, mwtest_res_table,
  de_table.ref.marked, reciprocal_matches = NA, the_test_dataset,
  the_ref_dataset, the_pval)

Arguments

the_test_group

Query group to make name for

mwtest_res_table

Mann-whitney test results as constructed in make_ref_similarity_names_using_marked

de_table.ref.marked

The output of get_the_up_genes_for_all_possible_groups for the contrast of interest.

reciprocal_matches

Simplified table of reciprocal matches prepared within make_ref_similarity_names_using_marked. If omitted no reciprocal matching done. Default = NA.

the_test_dataset

A short meaningful name for the experiment. (Should match test_dataset column in de_table.marked)

the_ref_dataset

A short meaningful name for the experiment. (Should match dataset column in de_table.marked)

the_pval

pval as per make_ref_similarity_names_using_marked

Value

A tibble with just one group's labelling information, as per make_ref_similarity_names_using_marked

See Also

make_ref_similarity_names_using_marked Only place that uses this function, details there.


celaref documentation built on Nov. 8, 2020, 5:03 p.m.