Man pages for cnvGSA
Gene Set Analysis of (Rare) Copy Number Variants

cnvGSAgsTablesCreates the gene-set tables for each gene-set.
cnvGSAInCreating the input S4 object needed to run the script.
CnvGSAInput-classClass '"CnvGSAInput"'
cnvGSAlogRegTestPerforming the logistic regression tests on the CNV data.
CnvGSAOutput-classClass '"CnvGSAOutput"'
cnvGSA-packageGene-set Analysis of (Rare) Copy Number Variants
f.enrFilesPrepares the files for the enrichment maps.
f.makeVizCreates the plots from the CnvGSAOutput data.
f.readConfigReading in the config file.
cnvGSA documentation built on Nov. 17, 2017, 8:25 a.m.