condcompPlot: Plots the data frame of comparison of data conditions
In condcomp: Condition Comparison in scRNA-seq Data

Description Usage Arguments Details Value Examples

This function takes the output from condcomp and plots some of its attributes in a scatter plot.

1	condcompPlot(ccomp, col = ccomp$iqr, main = NULL, legend.title = "IQR")

`ccomp`	A data frame output from `condcomp`.
`col`	Color parameter to be used. The default is to color according to the IQR column of `ccomp`.
`main`	Character vector (or expression) giving plot title.
`legend.title`	Character vector giving the legend title.

The first condition ratio that appears in the data frame will be plotted in the y-axis (-log10 scale), whereas the Z-score will be plotted along the x-axis. Each group will be colored by their respective IQR value as shown in the legend.

A ggplot2 object.

clustering <- iris$Species
dmatrix <- as.matrix(dist(iris[-length(iris)]))
# Suppose the conditions are 'young' and 'old' fish
cond <- sample(c("young", "old"), nrow(iris), replace=TRUE)
comp <- condcomp(clustering, cond, dmatrix=dmatrix, n=10)
condcompPlot(comp)