quantify_combined: Generate report with combined ion intensities

In cosmiq: cosmiq - COmbining Single Masses Into Quantities

Description

quantify_combined calculates a data table of mz intensities from a sum of ions within a selected mz window and from all MS scans.

Usage

    quantify_combined(xs,xy, rtcombine)

Arguments

xs	xcmsSet object
xy	table including mz location parameters
rtcombine	Numerical, with two entries. If no retention time information is to be used, rtcombine provides the retention time window where ion intensities will be summed for quantification. If rtcombine = c(0,0), All scans will be used

Details

This function is only used, when no retention time information should be used, for example with direct infusion experiments.

Author(s)

David Fischer 2013

Examples

      ## Not run: 
    #  see package vignette
      
## End(Not run)

cosmiq documentation built on Nov. 8, 2020, 6:47 p.m.