covRNA: Multivariate Analysis of Transcriptomic Data
Version 1.2.0

This package provides the analysis methods fourthcorner and RLQ analysis for large-scale transcriptomic data.

Browse man pages Browse package API and functions Browse package files

AuthorLara Urban <lara.h.urban@ebi.ac.uk>
Bioconductor views GeneExpression Transcription
Date of publicationNone
MaintainerLara Urban <lara.h.urban@ebi.ac.uk>
LicenseGPL (>= 2)
Version1.2.0
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("covRNA")

Man pages

Baca: The Baca dataset
covRNA: The covRNA package
ord: RLQ for transcriptomic data
plot.ord: Plot RLQ for transcriptomic data
plot.stat: Plot the fourthcorner analysis for transcriptomic data
stat: Fourthcorner analysis for transcriptomic data
vis: Simultaneous visualisation of transcriptomic data by...

Functions

Baca Man page
covRNA Man page
ord Man page Source code
plot.ord Man page Source code
plot.stat Man page Source code
stat Man page Source code
vis Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/ord.R
R/plot.ord.R
R/plot.stat.R
R/stat.R
R/vis.R
README.md
build
build/vignette.rds
data
data/Baca.rda
inst
inst/NEWS
inst/doc
inst/doc/covRNA.R
inst/doc/covRNA.Rmd
inst/doc/covRNA.html
man
man/Baca.Rd
man/covRNA.Rd
man/ord.Rd
man/plot.ord.Rd
man/plot.stat.Rd
man/stat.Rd
man/vis.Rd
vignettes
vignettes/covRNA.Rmd
covRNA documentation built on May 20, 2017, 9:16 p.m.