csawUsersGuide: View csaw user's guide

In csaw: ChIP-Seq Analysis with Windows

Description

Finds the location of the user's guide and opens it for viewing.

Usage

csawUsersGuide()

Details

The csaw package is designed for de novo detection of differentially bound regions from ChIP-seq data. It provides methods for window-based counting, normalization, filtering and statistical analyses via edgeR. The user guide for this package can be obtained by running this function.

The user's guide is obtained online from the csawUsersGuide package. We do not build the guide as a vignette in csaw itself due to the time-consuming nature of the code when run on realistic case studies. This does mean, though, that this function requires an internet connection to work properly.

Value

The user's guide is opened on the system's default browser.

Author(s)

Aaron Lun

See Also

browseURL

Examples

if (interactive()) csawUsersGuide()

csaw documentation built on Nov. 12, 2020, 2:03 a.m.