ctc: Cluster and Tree Conversion.

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Tools for export and import classification trees and clusters to other programs

Author
Antoine Lucas <antoinelucas@gmail.com>, Laurent Gautier <laurent@cbs.dtu.dk>
Date of publication
None
Maintainer
Antoine Lucas <antoinelucas@gmail.com>
License
GPL-2
Version
1.48.0
URLs

View on Bioconductor

Man pages

hc2Newick
Convert hclust objects to Newick format files
hclust2treeview
Hierarchical clustering and treeview export
r2cluster
Write to Cluster file format
r2gtr
Write to gtr, atr, cdt file format
r2xcluster
Write to Xcluster file format
read.eisen
Read expression data from a file formatted for Eisen...
xcluster
Hierarchical clustering
xcluster2r
Importing Xcluster/Cluster output

Files in this package

ctc/Changes
ctc/DESCRIPTION
ctc/NAMESPACE
ctc/R
ctc/R/hc2Newick.R
ctc/R/hclust2treeview.R
ctc/R/r2cdt.R
ctc/R/r2cluster.R
ctc/R/r2gtr.R
ctc/R/r2xcluster.R
ctc/R/read.eisen.R
ctc/R/xcluster.R
ctc/R/xcluster2r.R
ctc/R/zzz.R
ctc/build
ctc/build/vignette.rds
ctc/demo
ctc/demo/00Index
ctc/demo/ctc.R
ctc/exec
ctc/exec/ctc.php
ctc/inst
ctc/inst/doc
ctc/inst/doc/ctc.R
ctc/inst/doc/ctc.Rnw
ctc/inst/doc/ctc.pdf
ctc/man
ctc/man/hc2Newick.Rd
ctc/man/hclust2treeview.Rd
ctc/man/r2cluster.Rd
ctc/man/r2gtr.Rd
ctc/man/r2xcluster.Rd
ctc/man/read.eisen.Rd
ctc/man/xcluster.Rd
ctc/man/xcluster2r.Rd
ctc/vignettes
ctc/vignettes/ctc.Rnw