ctgGEM (cell tree generator for Gene Expression Matrices)

ctgGEM is an R package that combines a variety of visualization packages for single cell RNA tree hierarchies. This package provides users with a streamlined, simplified way to construct hierarchies from the workflows of these packages using one function call with a single centralized data object and the desired visualization package name as a parameter. Currently supported packages are:

For a guide on using the features of ctgGEM and the types of data required for each visualization, please see the package vignette.

Authors: Mark Block and Carrie Minette Maintainer: USD Biomedical Engineering

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ctgGEM documentation built on Nov. 8, 2020, 5:54 p.m.