makeMonocle: A Cell Tree Generating Function using monocle
In ctgGEM: Generating Tree Hierarchy Visualizations from Gene Expression Data
Description
Usage
Arguments
Value
Description
This function, called by generate_tree, creates a cell tree
using the monocle package. This function utilizes code
from the monocle vignette R script.
Usage
1
makeMonocle(dataSet, outputDir = NULL)
Arguments
dataSet
a ctgGEMset object
outputDir
the directory where output should be saved, defaults to
the temporary location returned by tempdir()
Value
an updated ctgGEMset object
ctgGEM documentation built on Nov. 8, 2020, 5:54 p.m.
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Description Usage Arguments Value
Description
This function, called by generate_tree, creates a cell tree
using the monocle package. This function utilizes code
from the monocle vignette R script.
Usage
1 | makeMonocle(dataSet, outputDir = NULL)
|
Arguments
dataSet |
a ctgGEMset object |
outputDir |
the directory where output should be saved, defaults to
the temporary location returned by |
Value
an updated ctgGEMset object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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