ecolitk: Meta-data and tools for E. coli

Meta-data and tools to work with E. coli. The tools are mostly plotting functions to work with circular genomes. They can used with other genomes/plasmids.

AuthorLaurent Gautier
Date of publicationNone
MaintainerLaurent Gautier <lgautier@gmail.com>
LicenseGPL (>= 2)
Version1.46.0

View on Bioconductor

Files in this package

ecolitk/DESCRIPTION
ecolitk/NAMESPACE
ecolitk/R
ecolitk/R/internalFuncs.R ecolitk/R/polygonCircle.R ecolitk/R/rotate.R ecolitk/R/wapply.R
ecolitk/build
ecolitk/build/vignette.rds
ecolitk/data
ecolitk/data/datalist
ecolitk/data/ecoli.genome.rda
ecolitk/data/ecoli.m52.genome.rda
ecolitk/data/ecoligenome.operon.rda
ecolitk/data/ecoligenomeBNUM.rda
ecolitk/data/ecoligenomeBNUM2ENZYME.rda
ecolitk/data/ecoligenomeBNUM2GENBANK.rda
ecolitk/data/ecoligenomeBNUM2GENEPRODUCT.rda
ecolitk/data/ecoligenomeBNUM2MULTIFUN.rda
ecolitk/data/ecoligenomeBNUM2STRAND.rda
ecolitk/data/ecoligenomeBNUM2SYMBOL.rda
ecolitk/data/ecoligenomeCHRLOC.rda
ecolitk/data/ecoligenomeMULTIFUN2GO.rda
ecolitk/data/ecoligenomeSTRAND.rda
ecolitk/data/ecoligenomeSYMBOL.rda
ecolitk/data/ecoligenomeSYMBOL2AFFY.rda
ecolitk/data/ecoligenomeSYMBOL2BNUM.rda
ecolitk/data/multiFun.rda
ecolitk/inst
ecolitk/inst/doc
ecolitk/inst/doc/ecolitk.R
ecolitk/inst/doc/ecolitk.Rnw
ecolitk/inst/doc/ecolitk.pdf
ecolitk/man
ecolitk/man/ecoli.data.Rd ecolitk/man/ecoligenome.operon.Rd ecolitk/man/ecoligenomeBNUM.Rd ecolitk/man/ecoligenomeBNUM2MULTIFUN.Rd ecolitk/man/gccontent.Rd ecolitk/man/linkedmultiget.Rd ecolitk/man/multiFun.Rd ecolitk/man/pointsCircle.Rd ecolitk/man/polar2xy.Rd ecolitk/man/polygonChrom.Rd ecolitk/man/wstringapply.Rd
ecolitk/vignettes
ecolitk/vignettes/00Index.dcf
ecolitk/vignettes/ecolitk.Rnw

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