Files in eisaR

Exon-Intron Split Analysis (EISA) in R

NEWS.md README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

R/eisa-package.R R/getTx2Gene.R R/runEISA.R R/getRegionsFromTxDb.R R/plotEISA.R R/getFeatureRanges.R R/exportToGtf.R vignettes/rna-velocity.Rmd vignettes/eisaR.Rmd

vignettes/refs.bib

man/getRegionsFromTxDb.Rd man/eisaR-package.Rd man/exportToGtf.Rd man/runEISA.Rd man/getTx2Gene.Rd man/getFeatureRanges.Rd man/plotEISA.Rd tests/testthat.R tests/testthat/test_getIntronAndTxSeqs.R tests/testthat/test_plotEISA.R tests/testthat/test_runEISA.R tests/testthat/test_getRegionsFromTxDb.R

inst/CITATION

inst/doc/rna-velocity.Rmd

inst/doc/rna-velocity.html

inst/doc/eisaR.R inst/doc/rna-velocity.R inst/doc/eisaR.Rmd

inst/doc/eisaR.html

inst/extdata/small_example_txome.fa

inst/extdata/small_example_t2g.txt

inst/extdata/Fig3abc_GSE33252_rawcounts_intronic.rds

inst/extdata/small_example_genome.fa

inst/extdata/hg19sub.sqlite

inst/extdata/small_example.gtf

inst/extdata/Fig3abc_GSE33252_rawcounts_exonic.rds

inst/extdata/gencode.v28.annotation.sub.gtf

inst/scripts/generate_example_data.R

eisaR documentation built on Nov. 8, 2020, 8:26 p.m.