Data container for epiviz data server

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Description

Data container for epiviz data server

Methods

get_default_chart_type()

Get name of default chart type for this data type

get_id()

Get id provided by manager EpivizDataMgr-class

get_measurements()

Get description of measurements served by this object

get_name()

Get datasource name, usually set by manager EpivizDataMgr-class

get_rows(query, metadata, useOffset = FALSE)

Get genomic interval information overlapping query <GenomicRanges> region

get_values(query, measurement, round = TRUE)

Get measurement values for features overlapping query region <GenomicRanges

parse_measurement(ms_id = NULL)

Parse a measurement description for data served by this object

set_id(id)

Set id, used by manager EpivizDataMgr-class

set_limits(ylim)

Set plotting limits for continuous data

set_mgr(mgr)

Set data manager, EpivizDataMgr-class

set_name(name)

Set datasource name, usually set by manager EpivizDataMgr-class

update(new_object, send_request = TRUE)

Update underlying data object with new object