epivizrData: Data Management API for epiviz interactive visualization app

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Serve data from Bioconductor Objects through a WebSocket connection.

Author
Hector Corrada Bravo [aut, cre], Florin Chelaru [aut]
Date of publication
None
Maintainer
Hector Corrada Bravo <hcorrada@gmail.com>
License
MIT + file LICENSE
Version
1.2.0
URLs

View on Bioconductor

Man pages

as.list-EpivizMeasurement-method
Convert 'EpivizMeasurement' object to 'list'
createMgr
Create a data manager for epiviz app
EpivizBlockData-class
Data container for interval data.
EpivizBpData-class
Container for basepair level numeric data
EpivizData-class
Data container for epiviz data server
EpivizDataMgr-class
Class providing data manager for epiviz app
EpivizFeatureData-class
Data container for RangedSummarizedExperiment objects
EpivizGeneInfoData-class
Container for gene annotation data
EpivizMeasurement-class
Class encapsulating a measurement description for epiviz app.
epivizrData
epivizrData
register
Generic method to register data to the data server
show-EpivizMeasurement-method
Display measurement datasourceId and id

Files in this package

epivizrData/DESCRIPTION
epivizrData/LICENSE
epivizrData/NAMESPACE
epivizrData/NEWS.md
epivizrData/R
epivizrData/R/EpivizBlockData-class.R
epivizrData/R/EpivizBpData-class.R
epivizrData/R/EpivizData-class.R
epivizrData/R/EpivizDataMgr-class.R
epivizrData/R/EpivizFeatureData-class.R
epivizrData/R/EpivizGeneInfoData-class.R
epivizrData/R/EpivizMeasurement-class.R
epivizrData/R/EpivizTrackData-class.R
epivizrData/R/createMgr.R
epivizrData/R/epivizrData-package.R
epivizrData/R/make_gene_info_gr.R
epivizrData/R/register-methods.R
epivizrData/build
epivizrData/build/vignette.rds
epivizrData/inst
epivizrData/inst/NEWS.Rd
epivizrData/inst/doc
epivizrData/inst/doc/epivizrData.R
epivizrData/inst/doc/epivizrData.Rmd
epivizrData/inst/doc/epivizrData.html
epivizrData/man
epivizrData/man/EpivizBlockData-class.Rd
epivizrData/man/EpivizBpData-class.Rd
epivizrData/man/EpivizData-class.Rd
epivizrData/man/EpivizDataMgr-class.Rd
epivizrData/man/EpivizFeatureData-class.Rd
epivizrData/man/EpivizGeneInfoData-class.Rd
epivizrData/man/EpivizMeasurement-class.Rd
epivizrData/man/as.list-EpivizMeasurement-method.Rd
epivizrData/man/createMgr.Rd
epivizrData/man/epivizrData.Rd
epivizrData/man/register.Rd
epivizrData/man/show-EpivizMeasurement-method.Rd
epivizrData/tests
epivizrData/tests/connected_tests
epivizrData/tests/connected_tests/helper-makeEset.R
epivizrData/tests/connected_tests/helper-phantomjs.R
epivizrData/tests/connected_tests/helper-wait_until.R
epivizrData/tests/connected_tests/index.html
epivizrData/tests/connected_tests/test-connected_management.R
epivizrData/tests/connected_tests/test-connected_update.R
epivizrData/tests/connected_tests/test-connection.R
epivizrData/tests/connected_tests/test-mgr_fetch.R
epivizrData/tests/connected_tests/test-seqinfo.R
epivizrData/tests/testthat
epivizrData/tests/testthat.R
epivizrData/tests/testthat/helper-makeEset.R
epivizrData/tests/testthat/helper-organismdb.R
epivizrData/tests/testthat/helper-wait_until.R
epivizrData/tests/testthat/test-creation.R
epivizrData/tests/testthat/test-data_fetch.R
epivizrData/tests/testthat/test-data_update.R
epivizrData/tests/testthat/test-get_measurements.R
epivizrData/tests/testthat/test-management.R
epivizrData/tests/testthat/test-mgr_fetch.R
epivizrData/tests/testthat/test-register.R
epivizrData/tests/testthat/test-seqinfo.R
epivizrData/vignettes
epivizrData/vignettes/epivizrData.Rmd