escape: Easy single cell analysis platform for enrichment

A bridging R package to facilitate gene set enrichment analysis (GSEA) in the context of single-cell RNA sequencing. Using raw count information, Seurat objects, or SingleCellExperiment format, users can perform and visualize GSEA across individual cells.

README.md Using escape to perform ssGSEA analyses on single-cell RNA-seq data

Vignettes Man pages API and functions Files

Package details
Author	Nick Borcherding [aut, cre], Jared Andrews [aut]
Bioconductor views	Annotation Classification GeneSetEnrichment GeneSignaling Pathways Sequencing SingleCell Software
Maintainer	Nick Borcherding <ncborch@gmail.com>
License	Apache License 2.0
Version	1.0.0
Package repository	View on Bioconductor
Installation	Install the latest version of this package by entering the following in R: `if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("escape")`