escape: Easy single cell analysis platform for enrichment

A bridging R package to facilitate gene set enrichment analysis (GSEA) in the context of single-cell RNA sequencing. Using raw count information, Seurat objects, or SingleCellExperiment format, users can perform and visualize GSEA across individual cells.

Package details

AuthorNick Borcherding [aut, cre], Jared Andrews [aut]
Bioconductor views Annotation Classification GeneSetEnrichment GeneSignaling Pathways Sequencing SingleCell Software
MaintainerNick Borcherding <>
LicenseApache License 2.0
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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escape documentation built on Nov. 8, 2020, 8:21 p.m.