API for evaluomeR
Evaluation of Bioinformatics Metrics

Global functions
bioMetrics Man page
boot.cluster Source code
checkDirectory Source code
checkIfCanCluster Source code
checkKValue Source code Source code
checkStabilityQualityData Source code
claraCBI Source code
classifdist Source code
clujaccard Source code
clusterboot Source code
clusterbootWrapper Source code
clusteringWrapper Source code
createSE Source code
createSEList Source code
dbscanCBI Source code
disthclustCBI Source code
disthclusttreeCBI Source code
distnoisemclustCBI Source code
evaluomeRSupportedCBI Man page Source code
fAnova Source code
flemixModel Source code
getDataQualityRange Man page Source code
getFormattedK Source code
getLargestSilWidth Source code
getMeasureValue Source code
getOptimalKValue Man page Source code
globalMetric Man page
hclustCBI Source code
hclusttreeCBI Source code
helperGetCBI Source code
insertRow Source code
isReasonable Source code
isString Source code
jaccard.cluster Source code
kmeansCBI Source code
mahalCBI Source code
mergenormCBI Source code
metricsCorrelations Man page Source code
metrics_pca Source code
metrics_randomforest Source code
noisemclustCBI Source code
ontMetrics Man page
plot.clboot Source code
plotMetricsBoxplot Man page Source code
plotMetricsCluster Man page Source code
plotMetricsClusterComparison Man page Source code
plotMetricsMinMax Man page Source code
plotMetricsViolin Man page Source code
print.clboot Source code
quality Man page Source code
qualityRange Man page Source code
qualitySet Man page Source code
quiet Source code
rnaMetrics Man page
runMetricsCorrelationIMG Source code
runQualityIndicesSilhouette Source code
runQualityIndicesSilhouetteK_IMG Source code
runQualityIndicesSilhouetteMetric_IMG Source code
runSilhouetteIMG Source code
runSilhouetteTable Source code
runSilhouetteTableRange Source code
runStabilityIndex Source code
runStabilityIndexK_IMG Source code
runStabilityIndexMetric_IMG Source code
runStabilityIndexTableRange Source code
sample.min Source code
sample.range Source code
speccCBI Source code
stability Man page Source code
stabilityRange Man page Source code
stabilitySet Man page Source code
standardizeQualityData Source code
standardizeStabilityData Source code
evaluomeR documentation built on March 15, 2021, 6 p.m.