getDataQualityRange: Dataframe getter for 'qualityRange' function.
In evaluomeR: Evaluation of Bioinformatics Metrics
Description
Usage
Arguments
Value
Examples
Description
This method is a wrapper to retrieve a specific SummarizedExperiment given a k value from
the object returned by qualityRange function.
Usage
1
Arguments
data
The object returned by qualityRange function.
k
The desired k cluster.
Value
The SummarizedExperiment that contains information about the selected k cluster.
Examples
1
2
3
4
5
# Using example data from our package
data("ontMetrics")
qualityRangeData <- qualityRange(ontMetrics, k.range=c(3,5), getImages = FALSE)
# Getting dataframe that contains information about k=5
k5Data = getDataQualityRange(qualityRangeData, 5)
evaluomeR documentation built on March 15, 2021, 6 p.m.
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Description Usage Arguments Value Examples
Description
This method is a wrapper to retrieve a specific SummarizedExperiment given a k value from
the object returned by qualityRange function.
Usage
1 |
Arguments
data |
The object returned by |
k |
The desired |
Value
The SummarizedExperiment that contains information about the selected k cluster.
Examples
1 2 3 4 5 | # Using example data from our package
data("ontMetrics")
qualityRangeData <- qualityRange(ontMetrics, k.range=c(3,5), getImages = FALSE)
# Getting dataframe that contains information about k=5
k5Data = getDataQualityRange(qualityRangeData, 5)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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