testmat: Example results from fastMLA requiring all significance...

Description Usage Format Source References

Description

This data.frame contains example results from fastMLA. It is comprised of example triplets for all three methods of calculating significance: the full CNM, the simple CNM, and the direct estimate method. It is intended for use with examples using mass.CNM or fastboots.GLA

Usage

1

Format

A data frame containing 9 observations of 5 variables (three character("X1 or X2","X2 or X1","X3") and two numeric("est.rho1-rho0"and "GLA.value")

Source

Generated based on results obtained using the Spellman et al. dataset using methods extended from Ho et al.

References

Yen-Yi Ho, Giovanni Parmigiani, Thomas A Louis, and Leslie M Cope. Modeling liquid association. Biometrics, 67(1):133-141, 2011.

Paul T Spellman, Gavin Sherlock, Michael Q Zhang, Vishwanath R Iyer, Kirk Anders, Michael B Eisen, Patrick O Brown, David Botstein, and Bruce Futcher. Comprehensive identification of cell cycle regulated genes of the yeast saccharomyces cerevisiae by microarray hybridization. Molecular biology of the cell, 9(12):3273-3297, 1998.


fastLiquidAssociation documentation built on Nov. 17, 2017, 2:03 p.m.