testmat: Example results from fastMLA requiring all significance...
In fastLiquidAssociation: functions for genome-wide application of Liquid Association
Description
Usage
Format
Source
References
Description
This data.frame contains example results from fastMLA. It is comprised of example triplets for all three methods of calculating significance: the full CNM, the simple CNM, and the direct estimate method. It is intended for use with examples using mass.CNM or fastboots.GLA
Usage
1
Format
A data frame containing 9 observations of 5 variables (three character("X1 or X2","X2 or X1","X3") and two numeric("est.rho1-rho0"and "GLA.value")
Source
Generated based on results obtained using the Spellman et al. dataset using methods extended from Ho et al.
References
Yen-Yi Ho, Giovanni Parmigiani, Thomas A Louis, and Leslie M Cope. Modeling liquid association.
Biometrics, 67(1):133-141, 2011.
Paul T Spellman, Gavin Sherlock, Michael Q Zhang, Vishwanath R Iyer, Kirk Anders, Michael B Eisen,
Patrick O Brown, David Botstein, and Bruce Futcher. Comprehensive identification of cell cycle regulated
genes of the yeast saccharomyces cerevisiae by microarray hybridization. Molecular biology of the cell,
9(12):3273-3297, 1998.
fastLiquidAssociation documentation built on Nov. 8, 2020, 8:04 p.m.
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Description Usage Format Source References
Description
This data.frame contains example results from fastMLA. It is comprised of example triplets for all three methods of calculating significance: the full CNM, the simple CNM, and the direct estimate method. It is intended for use with examples using mass.CNM or fastboots.GLA
Usage
1 |
Format
A data frame containing 9 observations of 5 variables (three character("X1 or X2","X2 or X1","X3") and two numeric("est.rho1-rho0"and "GLA.value")
Source
Generated based on results obtained using the Spellman et al. dataset using methods extended from Ho et al.
References
Yen-Yi Ho, Giovanni Parmigiani, Thomas A Louis, and Leslie M Cope. Modeling liquid association. Biometrics, 67(1):133-141, 2011.
Paul T Spellman, Gavin Sherlock, Michael Q Zhang, Vishwanath R Iyer, Kirk Anders, Michael B Eisen, Patrick O Brown, David Botstein, and Bruce Futcher. Comprehensive identification of cell cycle regulated genes of the yeast saccharomyces cerevisiae by microarray hybridization. Molecular biology of the cell, 9(12):3273-3297, 1998.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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