fastLiquidAssociation: functions for genome-wide application of Liquid Association

This package extends the function of the LiquidAssociation package for genome-wide application. It integrates a screening method into the LA analysis to reduce the number of triplets to be examined for a high LA value and provides code for use in subsequent significance analyses.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("fastLiquidAssociation")
AuthorTina Gunderson
Bioconductor views CellBiology GeneExpression Genetics Pathways Software
Date of publicationNone
MaintainerTina Gunderson <gunderson.tina@gmail.com>
LicenseGPL-2
Version1.10.0

View on Bioconductor

Files

DESCRIPTION
NAMESPACE
R
R/fMLASetInternal.R R/fMLASetMethods.R
build
build/vignette.rds
data
data/testmat.RData
inst
inst/doc
inst/doc/fastLiquidAssociation.R
inst/doc/fastLiquidAssociation.Rnw
inst/doc/fastLiquidAssociation.pdf
man
man/fastLiquidAssociation-package.Rd man/fastMLA-methods.Rd man/fastboots.GLA-methods.Rd man/mass.CNM-methods.Rd man/testmat.Rd
vignettes
vignettes/50250compNL.jpeg
vignettes/PlanBJabref.bib
vignettes/fastLiquidAssociation.Rnw
vignettes/testmat.csv

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